visual
visual

세미나

  • HOME
  • >
  • 소식
  • >
  • 세미나
장소 KI bldg. 5th fl. Room B501 & Zoom 
일시 Jan. 18(Tue), 2pm-3pm 
연사 YoungJu Jo (Stanford University) 

[Seminar]

18 Jan 2022, Tue, 2pm-3pm, KI bldg. 5th fl. Room B501

Zoom: https://kaist.zoom.us/j/89586032430

회의 ID: 895 860 324 30

 

Data-driven interrogation of biological dynamics:
from subcellular interactions to neuronal networks in vivo

 

 

YoungJu Jo

PhD Candidate in Applied Physics, Deisseroth Laboratory, Stanford University

 

 

Biological systems are nonlinear dynamical systems consisting of heterogeneous entities. Understanding the logic of the complex spatiotemporal dynamics in such systems, robustly implementing specific biological functions, may require new approaches beyond the traditional hypothesis-driven experimental designs. Here we present a data-driven approach, enabled by high-throughput experimental and computational technologies, across multiple scales. We first discuss a computational imaging technique for simultaneously visualizing multiple aspects of subcellular dynamics [1, 2], its potential combination with molecular optogenetics to study the cell signaling networks, and the remaining challenges in these systems. Then we turn to neuronal networks in behaving animals where high-dimensional neural population activity could be reliably measured and perturbed over extended time. Synergizing with recent technical advances, we propose and experimentally demonstrate a unified deep learning framework to identify the underlying neural dynamical systems, reverse-engineer the neural computation implemented by the dynamics, and design spatiotemporally patterned optogenetic stimulation for naturalistic manipulation of animal behavior [3]. Application of this framework to the mouse habenular circuitry reveals cell-type-specific reward history coding implemented by line attractor dynamics [4].

 

References:

1. Jo*, Park* et al. Science Advances 3(8), e1700606, 2017.

2. Jo*, Cho*, Park* et al. Nature Cell Biology 23, 1329–1337, 2021.

3. Jo et al. in preparation.

4. Sylwestrak*, Vesuna*, Jo* et al. in revision.

 

문의: 박용근 교수 (내선:2514)

 

 

번호 일시 장소 연사 제목
126 Nov. 9 (Fri.), 02:30 PM  E6-2. 1st fl. #1323  Dr. Pilkyung Moon  Moiré superlattices – from twisted bilayer graphene to quasicrystal file
125 DEC. 11 (Tue), 04:00 PM  E6-2. 1st fl. #1323  Prof. Hiroshi Shinaoka  Natural compact representation of Matsubara Green’s functions: applications to analytic continuation and quantum many-body simulations file
124 Jun. 2 (Fri.), 02:30 PM  E6-2. 1st fl. #1323  Dr. Euyheon Hwang(황의헌)  Quasiparticle Interference and Fourier transform scanning tunneling spectroscopy in WTe2 (Weyl semimetal) file
123 Sep. 22 (Fri.), 01:00 PM  E6-2. 1st fl. #1323  Dr. EunSeong Kim / Department of Physics, KAIST  Superconductor-metal-insulator transition in thin Tantalum films file
122 Oct. 12 (Fri.), 02:30 PM  E6-2. 1st fl. #1323  Dr. Daniel Kyungdeock Park  Quantum Advantage in Learning Parity with Noise file
121 May. 12 (Fri.), 01:30 PM  E6-2. 1st fl. #1323  Dr. Young Kuk Kim  Topological Dirac insulator
120 Sep. 22 (Fri.), 02:30 PM  E6-2. 1st fl. #1323  Dr. GilHo Lee / Department of Physics, POSTECH  Quantum Electronic Transport in Graphene Hybrid Nanostructures file
119 Nov. 1 (Fri.), 04:00 PM  E6-2. 1st fl. #1323  Dr. Ju-Jin Kim  Electron transport through weak-bonded contact metal with low dimensional nano-material file
118 Mar. 16 (Fri.), 04:0 PM  E6-2. 1st fl. #1323  Dr. YoungDuck Kim  Van der Waals Heterostructures from Quantum Transport to Ultrafast Optoelectronics file
117 Mar. 29 (Fri.), 04:00 PM  E6-2. 1st fl. #1323  Dr. Taeyoung Choi  Coherent Quantum Control and Magnetism on atoms – Trapped ion and ESR STM file
116 Apr. 19 (Fri.), 04:00 PM  E6-2. 1st fl. #1323  Dr. Seok Kyun Son  Graphene and hBN heterostructures file
115 Apr. 19 (Fri.), 02:30 PM  E6-2. 1st fl. #1323  Dr. YoungWoo Nam  A family of finite-temperature electronic phase transitions in graphene multilayers file
114 Dec. 26 (Wed.), 04:00 PM  E6-2. 1st fl. #1323  Dr. Isaac H. Kim  Brane-like defect in 3D toric code file
113 May. 25(Wed), 4pm  E6-2. 1st fl. #1323 / Zoom  Dr. Sungwoo Hong (Enrico Fermi Institute at University of Chicago)  Uncovering New Lampposts for Dark Matter: Continuum or Conformal
112 Apr. 01 (Fri.) 2:30 PM  E6-2. 1st fl. #1501  Dr. KICHEON KANG, Chonnam National University  Interference of single charged particles without a loop and dynamic nonlocality
111 Apr. 01 (Fri.) 4:15 PM  E6-2. 1st fl. #1501  Dr. JONG SOO LIM, KIAS  Cotunneling drag effect in Coulomb-coupled quantum dots
110 2016/03/11 4 PM  E6-2. 1st fl. #1501  Dr. Tae-Hwan KIM (POSTECH)  Jan. Switching handedness of of chiral solitons in Z4 topological insulators
109 Apr. 08 (Fri.), 13:30 PM  E6-2. 1st fl. #1501  Dr. Yunkyu Bang, Chonnam National Univ.  Theoretical Overview of Iron-based superconductors and its future
108 2016/03/11 1:30 PM  E6-2. 1st fl. #1501  Dr. Kwon Park  Topological phases of matter in nonequilibrium: Topology of the Wannier-Stark ladder
107 2015/10/16, 4PM  E6-2. 2nd fl. #2501  Prof. Yung-Fu Chen(Solid-state Laser Physics Laboratory,National Central University)  Fluctuations of entropy production in partially masked electric circuits